Annotation
Type:RNAmaps
Analysis ID:52318
Created:2011-02-15 16:22:06
Note:-300..300, G from 20101125_LUjt8:3, iCLIP, TDP-43, tis.: SH-SY5Y, con.: Cytoplasmic, Hs

Inputs
G:20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz [133.0K]

Outputs
html-maps:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_maps.html [60.2K]
tab-stats:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_stats.tab.gz [2.0K]
tab-maps:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_maps.tab.gz [64.9K]
tab-junctions_in_exon-intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_exon-intron.tab.gz [11.8K]
tab-junctions_in_intron-exon_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_intron-exon.tab.gz [14.1K]
tab-junctions_in_5-ncRNA_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_5-ncRNA.tab.gz [3.9K]
tab-junctions_in_ncRNA-3_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_ncRNA-3.tab.gz [4.0K]
tab-junctions_in_ORF-3UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_ORF-3UTR.tab.gz [8.3K]
tab-junctions_in_5UTR-ORF_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_5UTR-ORF.tab.gz [963]
tab-junctions_in_inter-5UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_inter-5UTR.tab.gz [1.6K]
tab-junctions_in_3UTR-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_3UTR-inter.tab.gz [9.2K]
tab-junctions_in_inter-5_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_inter-5.tab.gz [3.7K]
tab-junctions_in_3-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_3-inter.tab.gz [11.6K]
tab-junctions_in_BP best in intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_sumjunct_BP best in intron.tab.gz [4.9K]
tab-junction_xlinks_in_exon-intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_exon-intron.tab.gz [12.6K]
bedGraph-junction_xlinks_in_exon-intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_exon-intron.bed.gz [8.3K]
tab-junction_xlinks_in_intron-exon_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_intron-exon.tab.gz [15.5K]
bedGraph-junction_xlinks_in_intron-exon_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_intron-exon.bed.gz [10.3K]
tab-junction_xlinks_in_5-ncRNA_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_5-ncRNA.tab.gz [4.9K]
bedGraph-junction_xlinks_in_5-ncRNA_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_5-ncRNA.bed.gz [3.7K]
tab-junction_xlinks_in_ncRNA-3_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_ncRNA-3.tab.gz [4.8K]
bedGraph-junction_xlinks_in_ncRNA-3_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_ncRNA-3.bed.gz [3.5K]
tab-junction_xlinks_in_ORF-3UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_ORF-3UTR.tab.gz [11.3K]
bedGraph-junction_xlinks_in_ORF-3UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_ORF-3UTR.bed.gz [8.1K]
tab-junction_xlinks_in_5UTR-ORF_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_5UTR-ORF.tab.gz [879]
bedGraph-junction_xlinks_in_5UTR-ORF_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_5UTR-ORF.bed.gz [848]
tab-junction_xlinks_in_inter-5UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_inter-5UTR.tab.gz [1.7K]
bedGraph-junction_xlinks_in_inter-5UTR_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_inter-5UTR.bed.gz [1.3K]
tab-junction_xlinks_in_3UTR-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_3UTR-inter.tab.gz [13.8K]
bedGraph-junction_xlinks_in_3UTR-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_3UTR-inter.bed.gz [9.6K]
tab-junction_xlinks_in_inter-5_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_inter-5.tab.gz [5.0K]
bedGraph-junction_xlinks_in_inter-5_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_inter-5.bed.gz [3.6K]
tab-junction_xlinks_in_3-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_3-inter.tab.gz [17.6K]
bedGraph-junction_xlinks_in_3-inter_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_3-inter.bed.gz [12.2K]
tab-junction_xlinks_in_BP best in intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_annotated_BP best in intron.tab.gz [5.6K]
bedGraph-junction_xlinks_in_BP best in intron_map:RNAmaps_id52318_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_G_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA-hits-in-genome.bed.gz_xlinks_BP best in intron.bed.gz [3.8K]