Annotation

Type:	RNAmaps
Analysis ID:	52324
Created:	2011-02-15 16:22:07
Note:	-300..300, S from 20101125_LUjt8:3, iCLIP, TDP-43, tis.: SH-SY5Y, con.: Cytoplasmic, Hs

Inputs

S:	20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz [148.4K]

Outputs

html-maps:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_maps.html [58.6K]
tab-stats:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_stats.tab.gz [2.0K]
tab-maps:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_maps.tab.gz [67.2K]
tab-junctions_in_exon-intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_exon-intron.tab.gz [12.7K]
tab-junctions_in_intron-exon_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_intron-exon.tab.gz [15.1K]
tab-junctions_in_5-ncRNA_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_5-ncRNA.tab.gz [4.4K]
tab-junctions_in_ncRNA-3_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_ncRNA-3.tab.gz [4.4K]
tab-junctions_in_ORF-3UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_ORF-3UTR.tab.gz [8.8K]
tab-junctions_in_5UTR-ORF_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_5UTR-ORF.tab.gz [1.0K]
tab-junctions_in_inter-5UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_inter-5UTR.tab.gz [1.6K]
tab-junctions_in_3UTR-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_3UTR-inter.tab.gz [9.6K]
tab-junctions_in_inter-5_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_inter-5.tab.gz [4.0K]
tab-junctions_in_3-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_3-inter.tab.gz [12.3K]
tab-junctions_in_BP best in intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_sumjunct_BP best in intron.tab.gz [5.4K]
tab-junction_xlinks_in_exon-intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_exon-intron.tab.gz [13.6K]
bedGraph-junction_xlinks_in_exon-intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_exon-intron.bed.gz [8.9K]
tab-junction_xlinks_in_intron-exon_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_intron-exon.tab.gz [16.6K]
bedGraph-junction_xlinks_in_intron-exon_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_intron-exon.bed.gz [11.0K]
tab-junction_xlinks_in_5-ncRNA_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_5-ncRNA.tab.gz [5.9K]
bedGraph-junction_xlinks_in_5-ncRNA_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_5-ncRNA.bed.gz [4.4K]
tab-junction_xlinks_in_ncRNA-3_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_ncRNA-3.tab.gz [5.5K]
bedGraph-junction_xlinks_in_ncRNA-3_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_ncRNA-3.bed.gz [4.0K]
tab-junction_xlinks_in_ORF-3UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_ORF-3UTR.tab.gz [12.1K]
bedGraph-junction_xlinks_in_ORF-3UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_ORF-3UTR.bed.gz [8.6K]
tab-junction_xlinks_in_5UTR-ORF_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_5UTR-ORF.tab.gz [948]
bedGraph-junction_xlinks_in_5UTR-ORF_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_5UTR-ORF.bed.gz [867]
tab-junction_xlinks_in_inter-5UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_inter-5UTR.tab.gz [1.8K]
bedGraph-junction_xlinks_in_inter-5UTR_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_inter-5UTR.bed.gz [1.4K]
tab-junction_xlinks_in_3UTR-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_3UTR-inter.tab.gz [14.5K]
bedGraph-junction_xlinks_in_3UTR-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_3UTR-inter.bed.gz [10.1K]
tab-junction_xlinks_in_inter-5_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_inter-5.tab.gz [5.8K]
bedGraph-junction_xlinks_in_inter-5_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_inter-5.bed.gz [4.2K]
tab-junction_xlinks_in_3-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_3-inter.tab.gz [18.9K]
bedGraph-junction_xlinks_in_3-inter_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_3-inter.bed.gz [13.2K]
tab-junction_xlinks_in_BP best in intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_annotated_BP best in intron.tab.gz [6.2K]
bedGraph-junction_xlinks_in_BP best in intron_map:	RNAmaps_id52324_maxUw-300_maxDw300_maxUf-1000_maxDf1000_20101125_LUjt8_3_hg19_ensembl59_S_iCLIP_TDP-43_SH-SY5Y_bedGraph-cDNA.bed.gz_xlinks_BP best in intron.bed.gz [4.2K]