Annotation
Protein:hnRNPC
Library ID:20090715_LUh6
Experiment ID:1
Replicate:8
Tissue:HeLa
Condition:
Species:Hs
FASTQ:iCLIP_hnRNPC_HeLa__hu_TGNNN_20090715_LUh6_1.fq.gz [131.1M]

Mapping (1164)
Mapped to:hg19
Annotation version:ensembl59
Last update:2011-10-07 20:26:44

Mapped files
B:20090715_LUh6_1_hg19_ensembl59_B_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [5.4M]
Ban:20090715_LUh6_1_hg19_ensembl59_Ban_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [15.6M]
Bsumbtype:20090715_LUh6_1_hg19_ensembl59_Bsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [3.8K]
Bsumgene:20090715_LUh6_1_hg19_ensembl59_Bsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [2.7M]
Bsumsegt:20090715_LUh6_1_hg19_ensembl59_Bsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [4.6M]
Bsumtype:20090715_LUh6_1_hg19_ensembl59_Bsumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.4K]
Btc:20090715_LUh6_1_hg19_ensembl59_Btc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [5.8M]
Bunf:20090715_LUh6_1_hg19_ensembl59_Bunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [5.4M]
Bunw:20090715_LUh6_1_hg19_ensembl59_Bunw_iCLIP_hnRNPC_HeLa_bedGraph-cDNAunweighted.bed.gz [4.3M]
Bws:20090715_LUh6_1_hg19_ensembl59_Bws_iCLIP_hnRNPC_HeLa_bedGraph-cDNAweights.bed.gz [5.3M]
C:20090715_LUh6_1_hg19_ensembl59_C_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [52.8K]
Creads:20090715_LUh6_1_hg19_ensembl59_Creads_iCLIP_hnRNPC_HeLa_bed.bed.gz [81.3K]
Csumbtype:20090715_LUh6_1_hg19_ensembl59_Csumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.1K]
Csumgene:20090715_LUh6_1_hg19_ensembl59_Csumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [844.1K]
Csumsegt:20090715_LUh6_1_hg19_ensembl59_Csumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.0M]
Csumtype:20090715_LUh6_1_hg19_ensembl59_Csumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [990]
Ctc:20090715_LUh6_1_hg19_ensembl59_Ctc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [56.9K]
D:20090715_LUh6_1_hg19_ensembl59_D_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [52.3K]
Dreads:20090715_LUh6_1_hg19_ensembl59_Dreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [81.3K]
Dsumbtype:20090715_LUh6_1_hg19_ensembl59_Dsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.1K]
Dsumgene:20090715_LUh6_1_hg19_ensembl59_Dsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [844.1K]
Dsumsegt:20090715_LUh6_1_hg19_ensembl59_Dsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.0M]
Dsumtype:20090715_LUh6_1_hg19_ensembl59_Dsumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [990]
Dtc:20090715_LUh6_1_hg19_ensembl59_Dtc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [56.1K]
Dxdel:20090715_LUh6_1_hg19_ensembl59_Dxdel_iCLIP_hnRNPC_HeLa_xlink-and-deletions.tab.gz [73.2K]
G:20090715_LUh6_1_hg19_ensembl59_G_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-hits-in-genome.bed.gz [1.9M]
Gan:20090715_LUh6_1_hg19_ensembl59_Gan_iCLIP_hnRNPC_HeLa_annotated-positions-hits-in-genome.tab.gz [5.6M]
Gsumbtype:20090715_LUh6_1_hg19_ensembl59_Gsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype-hits-in-genome.tab.gz [2.7K]
Gsumgene:20090715_LUh6_1_hg19_ensembl59_Gsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene-hits-in-genome.tab.gz [1.4M]
Gsumsegt:20090715_LUh6_1_hg19_ensembl59_Gsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment-hits-in-genome.tab.gz [3.6M]
Gsumtype:20090715_LUh6_1_hg19_ensembl59_Gsumtype_iCLIP_hnRNPC_HeLa_summary-by-type-hits-in-genome.tab.gz [1.2K]
Gunf:20090715_LUh6_1_hg19_ensembl59_Gunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered-hits-in-genome.bed.gz [1.9M]
M:20090715_LUh6_1_hg19_ensembl59_M_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [3.4M]
Man:20090715_LUh6_1_hg19_ensembl59_Man_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [10.1M]
Mreads:20090715_LUh6_1_hg19_ensembl59_Mreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [5.5M]
Msumbtype:20090715_LUh6_1_hg19_ensembl59_Msumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [3.6K]
Msumgene:20090715_LUh6_1_hg19_ensembl59_Msumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [2.3M]
Msumsegt:20090715_LUh6_1_hg19_ensembl59_Msumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [4.3M]
Msumtype:20090715_LUh6_1_hg19_ensembl59_Msumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.4K]
Mtc:20090715_LUh6_1_hg19_ensembl59_Mtc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [3.5M]
Mtcunf:20090715_LUh6_1_hg19_ensembl59_Mtcunf_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [3.5M]
Munf:20090715_LUh6_1_hg19_ensembl59_Munf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [3.4M]
Munw:20090715_LUh6_1_hg19_ensembl59_Munw_iCLIP_hnRNPC_HeLa_bedGraph-cDNAunweighted.bed.gz [2.5M]
Mws:20090715_LUh6_1_hg19_ensembl59_Mws_iCLIP_hnRNPC_HeLa_bedGraph-cDNAweights.bed.gz [3.3M]
S:20090715_LUh6_1_hg19_ensembl59_S_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [1.9M]
San:20090715_LUh6_1_hg19_ensembl59_San_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [5.7M]
Sreads:20090715_LUh6_1_hg19_ensembl59_Sreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [3.6M]
Ssumbtype:20090715_LUh6_1_hg19_ensembl59_Ssumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.7K]
Ssumgene:20090715_LUh6_1_hg19_ensembl59_Ssumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [1.4M]
Ssumsegt:20090715_LUh6_1_hg19_ensembl59_Ssumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.6M]
Ssumtype:20090715_LUh6_1_hg19_ensembl59_Ssumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.1K]
Stc:20090715_LUh6_1_hg19_ensembl59_Stc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [2.2M]
Stcunf:20090715_LUh6_1_hg19_ensembl59_Stcunf_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [2.2M]
Sunf:20090715_LUh6_1_hg19_ensembl59_Sunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [1.9M]
T:20090715_LUh6_1_hg19_ensembl59_T_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-hits-in-transcribed-regions.bed.gz [73.4K]
Tan:20090715_LUh6_1_hg19_ensembl59_Tan_iCLIP_hnRNPC_HeLa_annotated-positions-hits-in-transcribed-regions.tab.gz [280.6K]
Tsumbtype:20090715_LUh6_1_hg19_ensembl59_Tsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype-hits-in-transcribed-regions.tab.gz [2.3K]
Tsumgene:20090715_LUh6_1_hg19_ensembl59_Tsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene-hits-in-transcribed-regions.tab.gz [889.4K]
Tsumsegt:20090715_LUh6_1_hg19_ensembl59_Tsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment-hits-in-transcribed-regions.tab.gz [3.0M]
Tsumtype:20090715_LUh6_1_hg19_ensembl59_Tsumtype_iCLIP_hnRNPC_HeLa_summary-by-type-hits-in-transcribed-regions.tab.gz [1.1K]
Tunf:20090715_LUh6_1_hg19_ensembl59_Tunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered-hits-in-transcribed-regions.bed.gz [73.9K]

Analyses
RNAmaps: 54154 54160 70433 70436 71008
kmers: 54153 54159 57308 57310 70432 70435 71007
peaks: 54152 54158 70431 70434 71006