Annotation
Protein:hnRNPC
Library ID:20090715_LUh6
Experiment ID:3
Replicate:10
Tissue:HeLa
Condition:
Species:Hs
FASTQ:iCLIP_hnRNPC_HeLa__hu_CANNN_20090715_LUh6_3.fq.gz [68.9M]

Mapping (1166)
Mapped to:hg19
Annotation version:ensembl59
Last update:2011-10-17 08:29:34

Mapped files
B:20090715_LUh6_3_hg19_ensembl59_B_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [2.5M]
Ban:20090715_LUh6_3_hg19_ensembl59_Ban_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [7.7M]
Bsumbtype:20090715_LUh6_3_hg19_ensembl59_Bsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [3.6K]
Bsumgene:20090715_LUh6_3_hg19_ensembl59_Bsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [2.2M]
Bsumsegt:20090715_LUh6_3_hg19_ensembl59_Bsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [4.3M]
Bsumtype:20090715_LUh6_3_hg19_ensembl59_Bsumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.4K]
Btc:20090715_LUh6_3_hg19_ensembl59_Btc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [2.7M]
Bunf:20090715_LUh6_3_hg19_ensembl59_Bunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [2.5M]
Bunw:20090715_LUh6_3_hg19_ensembl59_Bunw_iCLIP_hnRNPC_HeLa_bedGraph-cDNAunweighted.bed.gz [2.0M]
Bws:20090715_LUh6_3_hg19_ensembl59_Bws_iCLIP_hnRNPC_HeLa_bedGraph-cDNAweights.bed.gz [2.5M]
C:20090715_LUh6_3_hg19_ensembl59_C_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [27.8K]
Creads:20090715_LUh6_3_hg19_ensembl59_Creads_iCLIP_hnRNPC_HeLa_bed.bed.gz [43.0K]
Csumbtype:20090715_LUh6_3_hg19_ensembl59_Csumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.0K]
Csumgene:20090715_LUh6_3_hg19_ensembl59_Csumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [809.9K]
Csumsegt:20090715_LUh6_3_hg19_ensembl59_Csumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.0M]
Csumtype:20090715_LUh6_3_hg19_ensembl59_Csumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [981]
Ctc:20090715_LUh6_3_hg19_ensembl59_Ctc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [30.0K]
D:20090715_LUh6_3_hg19_ensembl59_D_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [27.6K]
Dreads:20090715_LUh6_3_hg19_ensembl59_Dreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [43.0K]
Dsumbtype:20090715_LUh6_3_hg19_ensembl59_Dsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.0K]
Dsumgene:20090715_LUh6_3_hg19_ensembl59_Dsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [809.9K]
Dsumsegt:20090715_LUh6_3_hg19_ensembl59_Dsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.0M]
Dsumtype:20090715_LUh6_3_hg19_ensembl59_Dsumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [981]
Dtc:20090715_LUh6_3_hg19_ensembl59_Dtc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [29.8K]
Dxdel:20090715_LUh6_3_hg19_ensembl59_Dxdel_iCLIP_hnRNPC_HeLa_xlink-and-deletions.tab.gz [38.6K]
G:20090715_LUh6_3_hg19_ensembl59_G_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-hits-in-genome.bed.gz [771.5K]
Gan:20090715_LUh6_3_hg19_ensembl59_Gan_iCLIP_hnRNPC_HeLa_annotated-positions-hits-in-genome.tab.gz [2.5M]
Gsumbtype:20090715_LUh6_3_hg19_ensembl59_Gsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype-hits-in-genome.tab.gz [2.6K]
Gsumgene:20090715_LUh6_3_hg19_ensembl59_Gsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene-hits-in-genome.tab.gz [1.2M]
Gsumsegt:20090715_LUh6_3_hg19_ensembl59_Gsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment-hits-in-genome.tab.gz [3.4M]
Gsumtype:20090715_LUh6_3_hg19_ensembl59_Gsumtype_iCLIP_hnRNPC_HeLa_summary-by-type-hits-in-genome.tab.gz [1.1K]
Gunf:20090715_LUh6_3_hg19_ensembl59_Gunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered-hits-in-genome.bed.gz [778.5K]
M:20090715_LUh6_3_hg19_ensembl59_M_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [1.7M]
Man:20090715_LUh6_3_hg19_ensembl59_Man_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [5.3M]
Mreads:20090715_LUh6_3_hg19_ensembl59_Mreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [2.8M]
Msumbtype:20090715_LUh6_3_hg19_ensembl59_Msumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [3.4K]
Msumgene:20090715_LUh6_3_hg19_ensembl59_Msumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [2.0M]
Msumsegt:20090715_LUh6_3_hg19_ensembl59_Msumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [4.0M]
Msumtype:20090715_LUh6_3_hg19_ensembl59_Msumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.4K]
Mtc:20090715_LUh6_3_hg19_ensembl59_Mtc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [1.8M]
Mtcunf:20090715_LUh6_3_hg19_ensembl59_Mtcunf_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [1.8M]
Munf:20090715_LUh6_3_hg19_ensembl59_Munf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [1.7M]
Munw:20090715_LUh6_3_hg19_ensembl59_Munw_iCLIP_hnRNPC_HeLa_bedGraph-cDNAunweighted.bed.gz [1.3M]
Mws:20090715_LUh6_3_hg19_ensembl59_Mws_iCLIP_hnRNPC_HeLa_bedGraph-cDNAweights.bed.gz [1.7M]
S:20090715_LUh6_3_hg19_ensembl59_S_iCLIP_hnRNPC_HeLa_bedGraph-cDNA.bed.gz [800.6K]
San:20090715_LUh6_3_hg19_ensembl59_San_iCLIP_hnRNPC_HeLa_annotated-positions.tab.gz [2.6M]
Sreads:20090715_LUh6_3_hg19_ensembl59_Sreads_iCLIP_hnRNPC_HeLa_bed.bed.gz [1.6M]
Ssumbtype:20090715_LUh6_3_hg19_ensembl59_Ssumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype.tab.gz [2.6K]
Ssumgene:20090715_LUh6_3_hg19_ensembl59_Ssumgene_iCLIP_hnRNPC_HeLa_summary-by-gene.tab.gz [1.2M]
Ssumsegt:20090715_LUh6_3_hg19_ensembl59_Ssumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment.tab.gz [3.4M]
Ssumtype:20090715_LUh6_3_hg19_ensembl59_Ssumtype_iCLIP_hnRNPC_HeLa_summary-by-type.tab.gz [1.1K]
Stc:20090715_LUh6_3_hg19_ensembl59_Stc_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts.bed.gz [946.6K]
Stcunf:20090715_LUh6_3_hg19_ensembl59_Stcunf_iCLIP_hnRNPC_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [947.4K]
Sunf:20090715_LUh6_3_hg19_ensembl59_Sunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered.bed.gz [807.7K]
T:20090715_LUh6_3_hg19_ensembl59_T_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-hits-in-transcribed-regions.bed.gz [34.7K]
Tan:20090715_LUh6_3_hg19_ensembl59_Tan_iCLIP_hnRNPC_HeLa_annotated-positions-hits-in-transcribed-regions.tab.gz [136.4K]
Tsumbtype:20090715_LUh6_3_hg19_ensembl59_Tsumbtype_iCLIP_hnRNPC_HeLa_summary-by-biotype-hits-in-transcribed-regions.tab.gz [2.2K]
Tsumgene:20090715_LUh6_3_hg19_ensembl59_Tsumgene_iCLIP_hnRNPC_HeLa_summary-by-gene-hits-in-transcribed-regions.tab.gz [831.9K]
Tsumsegt:20090715_LUh6_3_hg19_ensembl59_Tsumsegt_iCLIP_hnRNPC_HeLa_summary-by-segment-hits-in-transcribed-regions.tab.gz [3.0M]
Tsumtype:20090715_LUh6_3_hg19_ensembl59_Tsumtype_iCLIP_hnRNPC_HeLa_summary-by-type-hits-in-transcribed-regions.tab.gz [1.1K]
Tunf:20090715_LUh6_3_hg19_ensembl59_Tunf_iCLIP_hnRNPC_HeLa_bedGraph-cDNA-unfiltered-hits-in-transcribed-regions.bed.gz [35.0K]

Analyses
RNAmaps: 54172 54178 70445 70448 71014
kmers: 54171 54177 57314 57316 70444 70447 71013
peaks: 54170 54176 70443 70446 71012