Annotation
Protein:TIA1
Library ID:20090724_LUd3
Experiment ID:2
Replicate:2
Tissue:HeLa
Condition:
Species:Hs
FASTQ:iCLIP_TIA1_Hela__hu_GANNN_20090724_LUd3_2.fq.gz [19.5M]

Mapping (2)
Mapped to:hg19
Annotation version:ensembl59
Last update:2011-10-07 20:26:52

Mapped files
B:20090724_LUd3_2_hg19_ensembl59_B_iCLIP_TIA1_HeLa_bedGraph-cDNA.bed.gz [263.6K]
Ban:20090724_LUd3_2_hg19_ensembl59_Ban_iCLIP_TIA1_HeLa_annotated-positions.tab.gz [927.6K]
Bsumbtype:20090724_LUd3_2_hg19_ensembl59_Bsumbtype_iCLIP_TIA1_HeLa_summary-by-biotype.tab.gz [3.3K]
Bsumgene:20090724_LUd3_2_hg19_ensembl59_Bsumgene_iCLIP_TIA1_HeLa_summary-by-gene.tab.gz [1.3M]
Bsumsegt:20090724_LUd3_2_hg19_ensembl59_Bsumsegt_iCLIP_TIA1_HeLa_summary-by-segment.tab.gz [3.4M]
Bsumtype:20090724_LUd3_2_hg19_ensembl59_Bsumtype_iCLIP_TIA1_HeLa_summary-by-type.tab.gz [1.3K]
Btc:20090724_LUd3_2_hg19_ensembl59_Btc_iCLIP_TIA1_HeLa_bedGraph-totalcounts.bed.gz [279.7K]
Bunf:20090724_LUd3_2_hg19_ensembl59_Bunf_iCLIP_TIA1_HeLa_bedGraph-cDNA-unfiltered.bed.gz [269.1K]
Bunw:20090724_LUd3_2_hg19_ensembl59_Bunw_iCLIP_TIA1_HeLa_bedGraph-cDNAunweighted.bed.gz [217.6K]
Bws:20090724_LUd3_2_hg19_ensembl59_Bws_iCLIP_TIA1_HeLa_bedGraph-cDNAweights.bed.gz [254.9K]
C:20090724_LUd3_2_hg19_ensembl59_C_iCLIP_TIA1_HeLa_bedGraph-cDNA.bed.gz [4.9K]
Creads:20090724_LUd3_2_hg19_ensembl59_Creads_iCLIP_TIA1_HeLa_bed.bed.gz [6.8K]
Csumbtype:20090724_LUd3_2_hg19_ensembl59_Csumbtype_iCLIP_TIA1_HeLa_summary-by-biotype.tab.gz [1.7K]
Csumgene:20090724_LUd3_2_hg19_ensembl59_Csumgene_iCLIP_TIA1_HeLa_summary-by-gene.tab.gz [766.2K]
Csumsegt:20090724_LUd3_2_hg19_ensembl59_Csumsegt_iCLIP_TIA1_HeLa_summary-by-segment.tab.gz [3.0M]
Csumtype:20090724_LUd3_2_hg19_ensembl59_Csumtype_iCLIP_TIA1_HeLa_summary-by-type.tab.gz [883]
Ctc:20090724_LUd3_2_hg19_ensembl59_Ctc_iCLIP_TIA1_HeLa_bedGraph-totalcounts.bed.gz [5.2K]
D:20090724_LUd3_2_hg19_ensembl59_D_iCLIP_TIA1_HeLa_bedGraph-cDNA.bed.gz [4.8K]
Dreads:20090724_LUd3_2_hg19_ensembl59_Dreads_iCLIP_TIA1_HeLa_bed.bed.gz [6.8K]
Dsumbtype:20090724_LUd3_2_hg19_ensembl59_Dsumbtype_iCLIP_TIA1_HeLa_summary-by-biotype.tab.gz [1.7K]
Dsumgene:20090724_LUd3_2_hg19_ensembl59_Dsumgene_iCLIP_TIA1_HeLa_summary-by-gene.tab.gz [766.2K]
Dsumsegt:20090724_LUd3_2_hg19_ensembl59_Dsumsegt_iCLIP_TIA1_HeLa_summary-by-segment.tab.gz [3.0M]
Dsumtype:20090724_LUd3_2_hg19_ensembl59_Dsumtype_iCLIP_TIA1_HeLa_summary-by-type.tab.gz [883]
Dtc:20090724_LUd3_2_hg19_ensembl59_Dtc_iCLIP_TIA1_HeLa_bedGraph-totalcounts.bed.gz [5.2K]
Dxdel:20090724_LUd3_2_hg19_ensembl59_Dxdel_iCLIP_TIA1_HeLa_xlink-and-deletions.tab.gz [6.5K]
G:20090724_LUd3_2_hg19_ensembl59_G_iCLIP_TIA1_HeLa_bedGraph-cDNA-hits-in-genome.bed.gz [387]
Gan:20090724_LUd3_2_hg19_ensembl59_Gan_iCLIP_TIA1_HeLa_annotated-positions-hits-in-genome.tab.gz [387]
Gsumbtype:20090724_LUd3_2_hg19_ensembl59_Gsumbtype_iCLIP_TIA1_HeLa_summary-by-biotype-hits-in-genome.tab.gz [1.3K]
Gsumgene:20090724_LUd3_2_hg19_ensembl59_Gsumgene_iCLIP_TIA1_HeLa_summary-by-gene-hits-in-genome.tab.gz [752.4K]
Gsumsegt:20090724_LUd3_2_hg19_ensembl59_Gsumsegt_iCLIP_TIA1_HeLa_summary-by-segment-hits-in-genome.tab.gz [2.9M]
Gsumtype:20090724_LUd3_2_hg19_ensembl59_Gsumtype_iCLIP_TIA1_HeLa_summary-by-type-hits-in-genome.tab.gz [600]
Gunf:20090724_LUd3_2_hg19_ensembl59_Gunf_iCLIP_TIA1_HeLa_bedGraph-cDNA-unfiltered-hits-in-genome.bed.gz [412]
M:20090724_LUd3_2_hg19_ensembl59_M_iCLIP_TIA1_HeLa_bedGraph-cDNA.bed.gz [263.7K]
Man:20090724_LUd3_2_hg19_ensembl59_Man_iCLIP_TIA1_HeLa_annotated-positions.tab.gz [927.7K]
Mreads:20090724_LUd3_2_hg19_ensembl59_Mreads_iCLIP_TIA1_HeLa_bed.bed.gz [362.7K]
Msumbtype:20090724_LUd3_2_hg19_ensembl59_Msumbtype_iCLIP_TIA1_HeLa_summary-by-biotype.tab.gz [3.4K]
Msumgene:20090724_LUd3_2_hg19_ensembl59_Msumgene_iCLIP_TIA1_HeLa_summary-by-gene.tab.gz [1.3M]
Msumsegt:20090724_LUd3_2_hg19_ensembl59_Msumsegt_iCLIP_TIA1_HeLa_summary-by-segment.tab.gz [3.4M]
Msumtype:20090724_LUd3_2_hg19_ensembl59_Msumtype_iCLIP_TIA1_HeLa_summary-by-type.tab.gz [1.4K]
Mtc:20090724_LUd3_2_hg19_ensembl59_Mtc_iCLIP_TIA1_HeLa_bedGraph-totalcounts.bed.gz [279.8K]
Mtcunf:20090724_LUd3_2_hg19_ensembl59_Mtcunf_iCLIP_TIA1_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [284.8K]
Munf:20090724_LUd3_2_hg19_ensembl59_Munf_iCLIP_TIA1_HeLa_bedGraph-cDNA-unfiltered.bed.gz [269.2K]
Munw:20090724_LUd3_2_hg19_ensembl59_Munw_iCLIP_TIA1_HeLa_bedGraph-cDNAunweighted.bed.gz [217.7K]
Mws:20090724_LUd3_2_hg19_ensembl59_Mws_iCLIP_TIA1_HeLa_bedGraph-cDNAweights.bed.gz [255.0K]
S:20090724_LUd3_2_hg19_ensembl59_S_iCLIP_TIA1_HeLa_bedGraph-cDNA.bed.gz [362]
San:20090724_LUd3_2_hg19_ensembl59_San_iCLIP_TIA1_HeLa_annotated-positions.tab.gz [372]
Sreads:20090724_LUd3_2_hg19_ensembl59_Sreads_iCLIP_TIA1_HeLa_bed.bed.gz [330]
Ssumbtype:20090724_LUd3_2_hg19_ensembl59_Ssumbtype_iCLIP_TIA1_HeLa_summary-by-biotype.tab.gz [1.2K]
Ssumgene:20090724_LUd3_2_hg19_ensembl59_Ssumgene_iCLIP_TIA1_HeLa_summary-by-gene.tab.gz [752.4K]
Ssumsegt:20090724_LUd3_2_hg19_ensembl59_Ssumsegt_iCLIP_TIA1_HeLa_summary-by-segment.tab.gz [2.9M]
Ssumtype:20090724_LUd3_2_hg19_ensembl59_Ssumtype_iCLIP_TIA1_HeLa_summary-by-type.tab.gz [585]
Stc:20090724_LUd3_2_hg19_ensembl59_Stc_iCLIP_TIA1_HeLa_bedGraph-totalcounts.bed.gz [376]
Stcunf:20090724_LUd3_2_hg19_ensembl59_Stcunf_iCLIP_TIA1_HeLa_bedGraph-totalcounts-unfiltered.bed.gz [400]
Sunf:20090724_LUd3_2_hg19_ensembl59_Sunf_iCLIP_TIA1_HeLa_bedGraph-cDNA-unfiltered.bed.gz [387]
T:20090724_LUd3_2_hg19_ensembl59_T_iCLIP_TIA1_HeLa_bedGraph-cDNA-hits-in-transcribed-regions.bed.gz [408]
Tan:20090724_LUd3_2_hg19_ensembl59_Tan_iCLIP_TIA1_HeLa_annotated-positions-hits-in-transcribed-regions.tab.gz [400]
Tsumbtype:20090724_LUd3_2_hg19_ensembl59_Tsumbtype_iCLIP_TIA1_HeLa_summary-by-biotype-hits-in-transcribed-regions.tab.gz [1.3K]
Tsumgene:20090724_LUd3_2_hg19_ensembl59_Tsumgene_iCLIP_TIA1_HeLa_summary-by-gene-hits-in-transcribed-regions.tab.gz [752.4K]
Tsumsegt:20090724_LUd3_2_hg19_ensembl59_Tsumsegt_iCLIP_TIA1_HeLa_summary-by-segment-hits-in-transcribed-regions.tab.gz [2.9M]
Tsumtype:20090724_LUd3_2_hg19_ensembl59_Tsumtype_iCLIP_TIA1_HeLa_summary-by-type-hits-in-transcribed-regions.tab.gz [613]
Tunf:20090724_LUd3_2_hg19_ensembl59_Tunf_iCLIP_TIA1_HeLa_bedGraph-cDNA-unfiltered-hits-in-transcribed-regions.bed.gz [433]

Analyses
RNAmaps: 48448 48454 70966
kmers: 48447 48453 55406 55408 70965
peaks: 48446 48452 70964