Annotation
Protein:TDP-43
Library ID:20100222_LUjt3
Experiment ID:4
Replicate:1
Tissue:Embrionic-Stem-Cells
Condition:
Species:Hs
FASTQ:iCLIP_TDP-43_Embrionic-Stem-Cells__hu_GANNN_20100222_LUjt3_4.fq.gz [518.2M]

Mapping (903)
Mapped to:hg19
Annotation version:ensembl59
Last update:2011-10-07 21:34:41

Mapped files
B:20100222_LUjt3_4_hg19_ensembl59_B_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA.bed.gz [25.4M]
Ban:20100222_LUjt3_4_hg19_ensembl59_Ban_iCLIP_TDP-43_Embrionic-Stem-Cells_annotated-positions.tab.gz [64.0M]
Bsumbtype:20100222_LUjt3_4_hg19_ensembl59_Bsumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype.tab.gz [4.3K]
Bsumgene:20100222_LUjt3_4_hg19_ensembl59_Bsumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene.tab.gz [3.7M]
Bsumsegt:20100222_LUjt3_4_hg19_ensembl59_Bsumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment.tab.gz [5.5M]
Bsumtype:20100222_LUjt3_4_hg19_ensembl59_Bsumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type.tab.gz [1.6K]
Btc:20100222_LUjt3_4_hg19_ensembl59_Btc_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts.bed.gz [26.9M]
Bunf:20100222_LUjt3_4_hg19_ensembl59_Bunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-unfiltered.bed.gz [25.4M]
Bunw:20100222_LUjt3_4_hg19_ensembl59_Bunw_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNAunweighted.bed.gz [21.7M]
Bws:20100222_LUjt3_4_hg19_ensembl59_Bws_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNAweights.bed.gz [24.6M]
C:20100222_LUjt3_4_hg19_ensembl59_C_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA.bed.gz [442.0K]
Creads:20100222_LUjt3_4_hg19_ensembl59_Creads_iCLIP_TDP-43_Embrionic-Stem-Cells_bed.bed.gz [747.0K]
Csumbtype:20100222_LUjt3_4_hg19_ensembl59_Csumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype.tab.gz [2.4K]
Csumgene:20100222_LUjt3_4_hg19_ensembl59_Csumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene.tab.gz [1.0M]
Csumsegt:20100222_LUjt3_4_hg19_ensembl59_Csumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment.tab.gz [3.2M]
Csumtype:20100222_LUjt3_4_hg19_ensembl59_Csumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type.tab.gz [1.1K]
Ctc:20100222_LUjt3_4_hg19_ensembl59_Ctc_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts.bed.gz [479.7K]
D:20100222_LUjt3_4_hg19_ensembl59_D_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA.bed.gz [427.5K]
Dreads:20100222_LUjt3_4_hg19_ensembl59_Dreads_iCLIP_TDP-43_Embrionic-Stem-Cells_bed.bed.gz [747.0K]
Dsumbtype:20100222_LUjt3_4_hg19_ensembl59_Dsumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype.tab.gz [2.4K]
Dsumgene:20100222_LUjt3_4_hg19_ensembl59_Dsumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene.tab.gz [1.0M]
Dsumsegt:20100222_LUjt3_4_hg19_ensembl59_Dsumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment.tab.gz [3.2M]
Dsumtype:20100222_LUjt3_4_hg19_ensembl59_Dsumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type.tab.gz [1.1K]
Dtc:20100222_LUjt3_4_hg19_ensembl59_Dtc_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts.bed.gz [461.0K]
Dxdel:20100222_LUjt3_4_hg19_ensembl59_Dxdel_iCLIP_TDP-43_Embrionic-Stem-Cells_xlink-and-deletions.tab.gz [628.4K]
G:20100222_LUjt3_4_hg19_ensembl59_G_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-hits-in-genome.bed.gz [13.1M]
Gan:20100222_LUjt3_4_hg19_ensembl59_Gan_iCLIP_TDP-43_Embrionic-Stem-Cells_annotated-positions-hits-in-genome.tab.gz [33.0M]
Gsumbtype:20100222_LUjt3_4_hg19_ensembl59_Gsumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype-hits-in-genome.tab.gz [3.0K]
Gsumgene:20100222_LUjt3_4_hg19_ensembl59_Gsumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene-hits-in-genome.tab.gz [2.0M]
Gsumsegt:20100222_LUjt3_4_hg19_ensembl59_Gsumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment-hits-in-genome.tab.gz [4.2M]
Gsumtype:20100222_LUjt3_4_hg19_ensembl59_Gsumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type-hits-in-genome.tab.gz [1.2K]
Gunf:20100222_LUjt3_4_hg19_ensembl59_Gunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-unfiltered-hits-in-genome.bed.gz [13.2M]
M:20100222_LUjt3_4_hg19_ensembl59_M_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA.bed.gz [11.3M]
Man:20100222_LUjt3_4_hg19_ensembl59_Man_iCLIP_TDP-43_Embrionic-Stem-Cells_annotated-positions.tab.gz [29.9M]
Mreads:20100222_LUjt3_4_hg19_ensembl59_Mreads_iCLIP_TDP-43_Embrionic-Stem-Cells_bed.bed.gz [18.6M]
Msumbtype:20100222_LUjt3_4_hg19_ensembl59_Msumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype.tab.gz [4.0K]
Msumgene:20100222_LUjt3_4_hg19_ensembl59_Msumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene.tab.gz [3.0M]
Msumsegt:20100222_LUjt3_4_hg19_ensembl59_Msumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment.tab.gz [4.8M]
Msumtype:20100222_LUjt3_4_hg19_ensembl59_Msumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type.tab.gz [1.5K]
Mtc:20100222_LUjt3_4_hg19_ensembl59_Mtc_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts.bed.gz [11.5M]
Mtcunf:20100222_LUjt3_4_hg19_ensembl59_Mtcunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts-unfiltered.bed.gz [11.5M]
Munf:20100222_LUjt3_4_hg19_ensembl59_Munf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-unfiltered.bed.gz [11.3M]
Munw:20100222_LUjt3_4_hg19_ensembl59_Munw_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNAunweighted.bed.gz [8.5M]
Mws:20100222_LUjt3_4_hg19_ensembl59_Mws_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNAweights.bed.gz [10.9M]
S:20100222_LUjt3_4_hg19_ensembl59_S_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA.bed.gz [13.4M]
San:20100222_LUjt3_4_hg19_ensembl59_San_iCLIP_TDP-43_Embrionic-Stem-Cells_annotated-positions.tab.gz [33.8M]
Sreads:20100222_LUjt3_4_hg19_ensembl59_Sreads_iCLIP_TDP-43_Embrionic-Stem-Cells_bed.bed.gz [27.6M]
Ssumbtype:20100222_LUjt3_4_hg19_ensembl59_Ssumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype.tab.gz [3.0K]
Ssumgene:20100222_LUjt3_4_hg19_ensembl59_Ssumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene.tab.gz [2.0M]
Ssumsegt:20100222_LUjt3_4_hg19_ensembl59_Ssumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment.tab.gz [4.3M]
Ssumtype:20100222_LUjt3_4_hg19_ensembl59_Ssumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type.tab.gz [1.2K]
Stc:20100222_LUjt3_4_hg19_ensembl59_Stc_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts.bed.gz [14.9M]
Stcunf:20100222_LUjt3_4_hg19_ensembl59_Stcunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-totalcounts-unfiltered.bed.gz [15.0M]
Sunf:20100222_LUjt3_4_hg19_ensembl59_Sunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-unfiltered.bed.gz [13.5M]
T:20100222_LUjt3_4_hg19_ensembl59_T_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-hits-in-transcribed-regions.bed.gz [351.9K]
Tan:20100222_LUjt3_4_hg19_ensembl59_Tan_iCLIP_TDP-43_Embrionic-Stem-Cells_annotated-positions-hits-in-transcribed-regions.tab.gz [1.1M]
Tsumbtype:20100222_LUjt3_4_hg19_ensembl59_Tsumbtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-biotype-hits-in-transcribed-regions.tab.gz [2.5K]
Tsumgene:20100222_LUjt3_4_hg19_ensembl59_Tsumgene_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-gene-hits-in-transcribed-regions.tab.gz [1.0M]
Tsumsegt:20100222_LUjt3_4_hg19_ensembl59_Tsumsegt_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-segment-hits-in-transcribed-regions.tab.gz [3.2M]
Tsumtype:20100222_LUjt3_4_hg19_ensembl59_Tsumtype_iCLIP_TDP-43_Embrionic-Stem-Cells_summary-by-type-hits-in-transcribed-regions.tab.gz [1.2K]
Tunf:20100222_LUjt3_4_hg19_ensembl59_Tunf_iCLIP_TDP-43_Embrionic-Stem-Cells_bedGraph-cDNA-unfiltered-hits-in-transcribed-regions.bed.gz [353.1K]

Analyses
RNAmaps: 39772 39778 71005
kmers: 39771 39777 46634 46636 71004 71271 71272 71591 71592 71593 71594 71595 71604 71605 71610 71611 71613
peaks: 39770 39776 71003